16S rRNA metaprofiling: Difference between revisions

From ActinoBase
No edit summary
No edit summary
 
(5 intermediate revisions by 2 users not shown)
Line 1: Line 1:
[https://greengenes.secondgenome.com Green Genes] 16S rRNA gene database  
[https://greengenes.secondgenome.com Green Genes] 16S rRNA gene database  


[http://qiime.org QIIME™] Canonically pronounced chime, stands for Quantitative Insights Into Microbial Ecology.
[https://www.arb-silva.de/ SILVA] 16S, 18S, SSU & LSU rRNA gene database
 
[http://qiime.org QIIME™] or [https://www.mothur.org Mothur] or [http://benjjneb.github.io/dada2/ dada2] for analyzing 16S rRNA gene sequences.

Latest revision as of 23:40, 17 November 2021

Green Genes 16S rRNA gene database

SILVA 16S, 18S, SSU & LSU rRNA gene database

QIIME™ or Mothur or dada2 for analyzing 16S rRNA gene sequences.