Sequence databases: Difference between revisions

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[https://bigfam.bioinformatics.nl/home BIG FAM] <sup>3</sup>
[https://bigfam.bioinformatics.nl/home BIG FAM] <sup>3</sup>


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#The antiSMASH database version 3: increased taxonomic coverage and new query features for modular enzymesKai Blin; Simon Shaw; Satria A. Kautsar; Marnix H. Medema; Tilmann Weber
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Nucleic Acids Research, gkaa978; doi: 10.1093/nar/gkaa978
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#Satria A Kautsar, Kai Blin, Simon Shaw, Jorge C Navarro-Muñoz, Barbara R Terlouw, Justin J J van der Hooft, Jeffrey A van Santen, Vittorio Tracanna, Hernando G Suarez Duran, Victòria Pascal Andreu, Nelly Selem-Mojica, Mohammad Alanjary, Serina L Robinson, George Lund, Samuel C Epstein, Ashley C Sisto, Louise K Charkoudian, Jérôme Collemare, Roger G Linington, Tilmann Weber, Marnix H Medema, MIBiG 2.0: a repository for biosynthetic gene clusters of known function, Nucleic Acids Research, Volume 48, Issue D1, 08 January 2020, Pages D454–D458, https://doi.org/10.1093/nar/gkz882 
#Satria A Kautsar, Kai Blin, Simon Shaw, Tilmann Weber, Marnix H Medema, BiG-FAM: the biosynthetic gene cluster families database, Nucleic Acids Research, Volume 49, Issue D1, 8 January 2021, Pages D490–D497, https://doi.org/10.1093/nar/gkaa812

Revision as of 23:56, 17 November 2021

EMBL

NCBI

IMG/M

JGI Genome Portal

AntiSMASH DB 1


MIBiG 2

  • Minimal information for Biosynthetic gene clusters

BIG FAM 3

  1. The antiSMASH database version 3: increased taxonomic coverage and new query features for modular enzymesKai Blin; Simon Shaw; Satria A. Kautsar; Marnix H. Medema; Tilmann Weber

Nucleic Acids Research, gkaa978; doi: 10.1093/nar/gkaa978

  1. Satria A Kautsar, Kai Blin, Simon Shaw, Jorge C Navarro-Muñoz, Barbara R Terlouw, Justin J J van der Hooft, Jeffrey A van Santen, Vittorio Tracanna, Hernando G Suarez Duran, Victòria Pascal Andreu, Nelly Selem-Mojica, Mohammad Alanjary, Serina L Robinson, George Lund, Samuel C Epstein, Ashley C Sisto, Louise K Charkoudian, Jérôme Collemare, Roger G Linington, Tilmann Weber, Marnix H Medema, MIBiG 2.0: a repository for biosynthetic gene clusters of known function, Nucleic Acids Research, Volume 48, Issue D1, 08 January 2020, Pages D454–D458, https://doi.org/10.1093/nar/gkz882
  2. Satria A Kautsar, Kai Blin, Simon Shaw, Tilmann Weber, Marnix H Medema, BiG-FAM: the biosynthetic gene cluster families database, Nucleic Acids Research, Volume 49, Issue D1, 8 January 2021, Pages D490–D497, https://doi.org/10.1093/nar/gkaa812