https://actinobase.org/index.php?action=history&feed=atom&title=Genome_browser
Genome browser - Revision history
2026-10-17T21:23:31Z
Revision history for this page on the wiki
MediaWiki 1.39.3
https://actinobase.org/index.php?title=Genome_browser&diff=1888&oldid=prev
Matt Hutchings at 07:31, 21 October 2021
2021-10-21T07:31:30Z
<p></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 07:31, 21 October 2021</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l16">Line 16:</td>
<td colspan="2" class="diff-lineno">Line 16:</td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Streptomyces venezuelae]]</em></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Streptomyces venezuelae]]</em></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Link - [https://<del style="font-weight: bold; text-decoration: none;">detoxbase</del>.org/projects/Microbiology/ActinoBase MORF Genome Browser ]</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Link - [https://<ins style="font-weight: bold; text-decoration: none;">morf-db</ins>.org/projects/Microbiology/ActinoBase MORF Genome Browser ]</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Using the browser you can see the location of every single gene along the genome, along with useful statistics such as the genome size and number of plasmids (if any). You can also browse the antiSMASH output the genome, and see which genes are contained within the putative biosynthetic gene clusters. Please feel free to contact us ([[Admin contact page]]) with any feedback or feature suggestions!</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Using the browser you can see the location of every single gene along the genome, along with useful statistics such as the genome size and number of plasmids (if any). You can also browse the antiSMASH output the genome, and see which genes are contained within the putative biosynthetic gene clusters. Please feel free to contact us ([[Admin contact page]]) with any feedback or feature suggestions!</div></td></tr>
</table>
Matt Hutchings
https://actinobase.org/index.php?title=Genome_browser&diff=1572&oldid=prev
Sam Prudence at 15:42, 20 February 2020
2020-02-20T15:42:36Z
<p></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 15:42, 20 February 2020</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l3">Line 3:</td>
<td colspan="2" class="diff-lineno">Line 3:</td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Click the link below for the ActinoBase MORF Genome Browser, with antiSMASH integration. This tool has been kindly provided to ActinoBase by [http://thomaslabyork.weebly.com/gavin.html Prof. Gavin Thomas] and [https://www.york.ac.uk/biology/itsupport/cfm/post_doc/profile.cfm?ID=1617 Dr. Victoria Springthorpe] at the University of York. </div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Click the link below for the ActinoBase MORF Genome Browser, with antiSMASH integration. This tool has been kindly provided to ActinoBase by [http://thomaslabyork.weebly.com/gavin.html Prof. Gavin Thomas] and [https://www.york.ac.uk/biology/itsupport/cfm/post_doc/profile.cfm?ID=1617 Dr. Victoria Springthorpe] at the University of York. </div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Currently we have the genomes for the following actinomycetes listed. If you have an actinomycete genome you would like to see <del style="font-weight: bold; text-decoration: none;">listed</del>, please don't hesitate to <del style="font-weight: bold; text-decoration: none;">Contact </del>us ([[Admin contact page]]) and ask! </div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Currently we have the genomes for the following actinomycetes listed. If you have an actinomycete genome you would like to see <ins style="font-weight: bold; text-decoration: none;">added</ins>, please don't hesitate to <ins style="font-weight: bold; text-decoration: none;">contact </ins>us (<ins style="font-weight: bold; text-decoration: none;">see </ins>[[Admin contact page]]) and ask! </div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>Propionibacterium freudenreichii</em> subsp. freudenreichii</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>Propionibacterium freudenreichii</em> subsp. freudenreichii</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Pseudonocardia]] autotrophica</em></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Pseudonocardia]] autotrophica</em></div></td></tr>
<tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l18">Line 18:</td>
<td colspan="2" class="diff-lineno">Line 18:</td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Link - [https://detoxbase.org/projects/Microbiology/ActinoBase MORF Genome Browser ]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Link - [https://detoxbase.org/projects/Microbiology/ActinoBase MORF Genome Browser ]</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Using the browser you can see the location of every single gene along the genome, along with useful statistics such as the genome size and number of plasmids (if any). You can also browse the antiSMASH output the genome, and see which genes are contained within the putative biosynthetic gene clusters. Please feel free to <del style="font-weight: bold; text-decoration: none;">Contact </del>us ([[Admin contact page]]) with any feedback or feature suggestions!</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Using the browser you can see the location of every single gene along the genome, along with useful statistics such as the genome size and number of plasmids (if any). You can also browse the antiSMASH output the genome, and see which genes are contained within the putative biosynthetic gene clusters. Please feel free to <ins style="font-weight: bold; text-decoration: none;">contact </ins>us ([[Admin contact page]]) with any feedback or feature suggestions!</div></td></tr>
</table>
Sam Prudence
https://actinobase.org/index.php?title=Genome_browser&diff=1569&oldid=prev
Sam Prudence at 15:39, 20 February 2020
2020-02-20T15:39:39Z
<p></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
<col class="diff-marker" />
<col class="diff-content" />
<col class="diff-marker" />
<col class="diff-content" />
<tr class="diff-title" lang="en-GB">
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 15:39, 20 February 2020</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l1">Line 1:</td>
<td colspan="2" class="diff-lineno">Line 1:</td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><h2><strong>ActinoBase Genome Browser</strong></h2></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><h2><strong>ActinoBase Genome Browser</strong></h2></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Click the link below for the ActinoBase MORF Genome Browser, with antiSMASH integration. This tool has been kindly provided to ActinoBase by [<del style="font-weight: bold; text-decoration: none;">Prof. Gavin Thomas </del>http://thomaslabyork.weebly.com/gavin.html] and [<del style="font-weight: bold; text-decoration: none;">Dr. Victoria Springthorpe </del>https://www.york.ac.uk/biology/itsupport/cfm/post_doc/profile.cfm?ID=1617] at the University of York. </div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Click the link below for the ActinoBase MORF Genome Browser, with antiSMASH integration. This tool has been kindly provided to ActinoBase by [http://thomaslabyork.weebly.com/gavin.html <ins style="font-weight: bold; text-decoration: none;">Prof. Gavin Thomas</ins>] and [https://www.york.ac.uk/biology/itsupport/cfm/post_doc/profile.cfm?ID=1617 <ins style="font-weight: bold; text-decoration: none;">Dr. Victoria Springthorpe</ins>] at the University of York. </div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Currently we have the genomes for the following actinomycetes listed. If you have an actinomycete genome you would like to see listed, please don't hesitate to Contact us ([[Admin contact page]]) and ask! </div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Currently we have the genomes for the following actinomycetes listed. If you have an actinomycete genome you would like to see listed, please don't hesitate to Contact us ([[Admin contact page]]) and ask! </div></td></tr>
<tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l16">Line 16:</td>
<td colspan="2" class="diff-lineno">Line 16:</td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Streptomyces venezuelae]]</em></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Streptomyces venezuelae]]</em></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Using the browser you can see the location of every single gene along the genome, along with useful statistics such as the genome size and number of plasmids (if any). You can also browse the antiSMASH output the genome, and see which genes are contained within the putative biosynthetic gene clusters. Please feel free to Contact us ([[Admin contact page]]) with any feedback or feature suggestions! </div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">Link - [https://detoxbase.org/projects/Microbiology/ActinoBase MORF Genome Browser ]</ins></div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">[MORF Genome Browser https://detoxbase.org/projects/Microbiology/ActinoBase]</del></div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div> </div></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Using the browser you can see the location of every single gene along the genome, along with useful statistics such as the genome size and number of plasmids (if any). You can also browse the antiSMASH output the genome, and see which genes are contained within the putative biosynthetic gene clusters. Please feel free to Contact us ([[Admin contact page]]) with any feedback or feature suggestions!</div></td></tr>
</table>
Sam Prudence
https://actinobase.org/index.php?title=Genome_browser&diff=1568&oldid=prev
Sam Prudence at 15:38, 20 February 2020
2020-02-20T15:38:47Z
<p></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
<col class="diff-marker" />
<col class="diff-content" />
<col class="diff-marker" />
<col class="diff-content" />
<tr class="diff-title" lang="en-GB">
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 15:38, 20 February 2020</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l1">Line 1:</td>
<td colspan="2" class="diff-lineno">Line 1:</td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><h2><strong>ActinoBase Genome Browser</strong></h2></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div><h2><strong>ActinoBase Genome Browser</strong></h2></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Click the link below for the ActinoBase MORF Genome Browser, with antiSMASH integration. This tool has been kindly provided to ActinoBase by <del style="font-weight: bold; text-decoration: none;">[</del>[Prof. Gavin Thomas http://thomaslabyork.weebly.com/gavin.html<del style="font-weight: bold; text-decoration: none;">]</del>] and [Dr. Victoria Springthorpe https://www.york.ac.uk/biology/itsupport/cfm/post_doc/profile.cfm?ID=1617] at the University of York. </div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Click the link below for the ActinoBase MORF Genome Browser, with antiSMASH integration. This tool has been kindly provided to ActinoBase by [Prof. Gavin Thomas http://thomaslabyork.weebly.com/gavin.html] and [Dr. Victoria Springthorpe https://www.york.ac.uk/biology/itsupport/cfm/post_doc/profile.cfm?ID=1617] at the University of York. </div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Currently we have the genomes for the following actinomycetes listed. If you have an actinomycete genome you would like to see listed, please don't hesitate to Contact us ([[Admin contact page]]) and ask! </div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Currently we have the genomes for the following actinomycetes listed. If you have an actinomycete genome you would like to see listed, please don't hesitate to Contact us ([[Admin contact page]]) and ask! </div></td></tr>
</table>
Sam Prudence
https://actinobase.org/index.php?title=Genome_browser&diff=1566&oldid=prev
Sam Prudence at 15:26, 20 February 2020
2020-02-20T15:26:40Z
<p></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
<col class="diff-marker" />
<col class="diff-content" />
<col class="diff-marker" />
<col class="diff-content" />
<tr class="diff-title" lang="en-GB">
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 15:26, 20 February 2020</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l6">Line 6:</td>
<td colspan="2" class="diff-lineno">Line 6:</td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>Propionibacterium freudenreichii</em> subsp. freudenreichii</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>Propionibacterium freudenreichii</em> subsp. freudenreichii</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Pseudonocardia]] autotrophica</em></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Pseudonocardia]] autotrophica</em></div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[<del style="font-weight: bold; text-decoration: none;">Salinospora</del>]] arenicola</em> CNS-205</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[<ins style="font-weight: bold; text-decoration: none;">Salinispora</ins>]] arenicola</em> CNS-205</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Streptomyces avermitilis]]</em> MA-4680 = NBRC 14893</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Streptomyces avermitilis]]</em> MA-4680 = NBRC 14893</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Streptomyces clavuligerus]]</em></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Streptomyces clavuligerus]]</em></div></td></tr>
</table>
Sam Prudence
https://actinobase.org/index.php?title=Genome_browser&diff=1562&oldid=prev
Sam Prudence at 15:24, 20 February 2020
2020-02-20T15:24:44Z
<p></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
<col class="diff-marker" />
<col class="diff-content" />
<col class="diff-marker" />
<col class="diff-content" />
<tr class="diff-title" lang="en-GB">
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 15:24, 20 February 2020</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l6">Line 6:</td>
<td colspan="2" class="diff-lineno">Line 6:</td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>Propionibacterium freudenreichii</em> subsp. freudenreichii</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>Propionibacterium freudenreichii</em> subsp. freudenreichii</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Pseudonocardia]] autotrophica</em></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Pseudonocardia]] autotrophica</em></div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[<del style="font-weight: bold; text-decoration: none;">Salinispora</del>]] arenicola</em> CNS-205</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[<ins style="font-weight: bold; text-decoration: none;">Salinospora</ins>]] arenicola</em> CNS-205</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Streptomyces avermitilis]]</em> MA-4680 = NBRC 14893</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Streptomyces avermitilis]]</em> MA-4680 = NBRC 14893</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Streptomyces clavuligerus]]</em></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Streptomyces clavuligerus]]</em></div></td></tr>
</table>
Sam Prudence
https://actinobase.org/index.php?title=Genome_browser&diff=1561&oldid=prev
Sam Prudence at 15:23, 20 February 2020
2020-02-20T15:23:45Z
<p></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
<col class="diff-marker" />
<col class="diff-content" />
<col class="diff-marker" />
<col class="diff-content" />
<tr class="diff-title" lang="en-GB">
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 15:23, 20 February 2020</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l3">Line 3:</td>
<td colspan="2" class="diff-lineno">Line 3:</td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Click the link below for the ActinoBase MORF Genome Browser, with antiSMASH integration. This tool has been kindly provided to ActinoBase by [[Prof. Gavin Thomas http://thomaslabyork.weebly.com/gavin.html]] and [Dr. Victoria Springthorpe https://www.york.ac.uk/biology/itsupport/cfm/post_doc/profile.cfm?ID=1617] at the University of York. </div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Click the link below for the ActinoBase MORF Genome Browser, with antiSMASH integration. This tool has been kindly provided to ActinoBase by [[Prof. Gavin Thomas http://thomaslabyork.weebly.com/gavin.html]] and [Dr. Victoria Springthorpe https://www.york.ac.uk/biology/itsupport/cfm/post_doc/profile.cfm?ID=1617] at the University of York. </div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Currently we have the genomes for the following actinomycetes listed. If you have an actinomycete genome you would like to see listed, please don't hesitate to Contact us ([[Admin <del style="font-weight: bold; text-decoration: none;">Contact Page</del>]]) and ask! </div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Currently we have the genomes for the following actinomycetes listed. If you have an actinomycete genome you would like to see listed, please don't hesitate to Contact us ([[Admin <ins style="font-weight: bold; text-decoration: none;">contact page</ins>]]) and ask! </div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>Propionibacterium freudenreichii</em> subsp. freudenreichii</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>Propionibacterium freudenreichii</em> subsp. freudenreichii</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Pseudonocardia]] autotrophica</em></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Pseudonocardia]] autotrophica</em></div></td></tr>
<tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l16">Line 16:</td>
<td colspan="2" class="diff-lineno">Line 16:</td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Streptomyces venezuelae]]</em></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Streptomyces venezuelae]]</em></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Using the browser you can see the location of every single gene along the genome, along with useful statistics such as the genome size and number of plasmids (if any). You can also browse the antiSMASH output the genome, and see which genes are contained within the putative biosynthetic gene clusters. Please feel free to Contact us ([[Admin <del style="font-weight: bold; text-decoration: none;">Contact Page</del>]]) with any feedback or feature suggestions! </div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Using the browser you can see the location of every single gene along the genome, along with useful statistics such as the genome size and number of plasmids (if any). You can also browse the antiSMASH output the genome, and see which genes are contained within the putative biosynthetic gene clusters. Please feel free to Contact us ([[Admin <ins style="font-weight: bold; text-decoration: none;">contact page</ins>]]) with any feedback or feature suggestions! </div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>[MORF Genome Browser https://detoxbase.org/projects/Microbiology/ActinoBase]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>[MORF Genome Browser https://detoxbase.org/projects/Microbiology/ActinoBase]</div></td></tr>
</table>
Sam Prudence
https://actinobase.org/index.php?title=Genome_browser&diff=1560&oldid=prev
Sam Prudence at 15:23, 20 February 2020
2020-02-20T15:23:22Z
<p></p>
<table style="background-color: #fff; color: #202122;" data-mw="interface">
<col class="diff-marker" />
<col class="diff-content" />
<col class="diff-marker" />
<col class="diff-content" />
<tr class="diff-title" lang="en-GB">
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 15:23, 20 February 2020</td>
</tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l3">Line 3:</td>
<td colspan="2" class="diff-lineno">Line 3:</td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Click the link below for the ActinoBase MORF Genome Browser, with antiSMASH integration. This tool has been kindly provided to ActinoBase by [[Prof. Gavin Thomas http://thomaslabyork.weebly.com/gavin.html]] and [Dr. Victoria Springthorpe https://www.york.ac.uk/biology/itsupport/cfm/post_doc/profile.cfm?ID=1617] at the University of York. </div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Click the link below for the ActinoBase MORF Genome Browser, with antiSMASH integration. This tool has been kindly provided to ActinoBase by [[Prof. Gavin Thomas http://thomaslabyork.weebly.com/gavin.html]] and [Dr. Victoria Springthorpe https://www.york.ac.uk/biology/itsupport/cfm/post_doc/profile.cfm?ID=1617] at the University of York. </div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Currently we have the genomes for the following actinomycetes listed. If you have an actinomycete genome you would like to see listed, please don't hesitate to [[Contact]] <del style="font-weight: bold; text-decoration: none;">us </del>and ask! </div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Currently we have the genomes for the following actinomycetes listed. If you have an actinomycete genome you would like to see listed, please don't hesitate to <ins style="font-weight: bold; text-decoration: none;">Contact us (</ins>[[<ins style="font-weight: bold; text-decoration: none;">Admin </ins>Contact <ins style="font-weight: bold; text-decoration: none;">Page</ins>]]<ins style="font-weight: bold; text-decoration: none;">) </ins>and ask! </div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>Propionibacterium freudenreichii</em> subsp. freudenreichii</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>Propionibacterium freudenreichii</em> subsp. freudenreichii</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Pseudonocardia]] autotrophica</em></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Pseudonocardia]] autotrophica</em></div></td></tr>
<tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l16">Line 16:</td>
<td colspan="2" class="diff-lineno">Line 16:</td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Streptomyces venezuelae]]</em></div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*<em>[[Streptomyces venezuelae]]</em></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br/></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Using the browser you can see the location of every single gene along the genome, along with useful statistics such as the genome size and number of plasmids (if any). You can also browse the antiSMASH output the genome, and see which genes are contained within the putative biosynthetic gene clusters. Please feel free to [[Contact]] <del style="font-weight: bold; text-decoration: none;">us </del>with any feedback or feature suggestions! </div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Using the browser you can see the location of every single gene along the genome, along with useful statistics such as the genome size and number of plasmids (if any). You can also browse the antiSMASH output the genome, and see which genes are contained within the putative biosynthetic gene clusters. Please feel free to <ins style="font-weight: bold; text-decoration: none;">Contact us (</ins>[[<ins style="font-weight: bold; text-decoration: none;">Admin </ins>Contact <ins style="font-weight: bold; text-decoration: none;">Page</ins>]]<ins style="font-weight: bold; text-decoration: none;">) </ins>with any feedback or feature suggestions! </div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>[MORF Genome Browser https://detoxbase.org/projects/Microbiology/ActinoBase]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>[MORF Genome Browser https://detoxbase.org/projects/Microbiology/ActinoBase]</div></td></tr>
</table>
Sam Prudence
https://actinobase.org/index.php?title=Genome_browser&diff=1559&oldid=prev
Sam Prudence: Created page with "<h2><strong>ActinoBase Genome Browser</strong></h2> Click the link below for the ActinoBase MORF Genome Browser, with antiSMASH integration. This tool has been kindly provide..."
2020-02-20T15:22:01Z
<p>Created page with "<h2><strong>ActinoBase Genome Browser</strong></h2> Click the link below for the ActinoBase MORF Genome Browser, with antiSMASH integration. This tool has been kindly provide..."</p>
<p><b>New page</b></p><div><h2><strong>ActinoBase Genome Browser</strong></h2><br />
<br />
Click the link below for the ActinoBase MORF Genome Browser, with antiSMASH integration. This tool has been kindly provided to ActinoBase by [[Prof. Gavin Thomas http://thomaslabyork.weebly.com/gavin.html]] and [Dr. Victoria Springthorpe https://www.york.ac.uk/biology/itsupport/cfm/post_doc/profile.cfm?ID=1617] at the University of York. <br />
<br />
Currently we have the genomes for the following actinomycetes listed. If you have an actinomycete genome you would like to see listed, please don't hesitate to [[Contact]] us and ask! <br />
*<em>Propionibacterium freudenreichii</em> subsp. freudenreichii<br />
*<em>[[Pseudonocardia]] autotrophica</em><br />
*<em>[[Salinispora]] arenicola</em> CNS-205<br />
*<em>[[Streptomyces avermitilis]]</em> MA-4680 = NBRC 14893<br />
*<em>[[Streptomyces clavuligerus]]</em><br />
*<em>[[Streptomyces coelicolor]]</em> A3(2)<br />
*<em>[[Streptomyces formicae]]</em><br />
*<em>[[Streptomyces griseus]]</em> subsp. griseus NBRC 13350<br />
*<em>[[Streptomyces rimosus]]</em><br />
*<em>[[Streptomyces scabiei]]</em> 87.22<br />
*<em>[[Streptomyces venezuelae]]</em><br />
<br />
Using the browser you can see the location of every single gene along the genome, along with useful statistics such as the genome size and number of plasmids (if any). You can also browse the antiSMASH output the genome, and see which genes are contained within the putative biosynthetic gene clusters. Please feel free to [[Contact]] us with any feedback or feature suggestions! <br />
[MORF Genome Browser https://detoxbase.org/projects/Microbiology/ActinoBase]</div>
Sam Prudence