Useful resources can be found here: Difference between revisions
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
===2024 SSAMM - Bioinformatics Tools and Online Resources=== | ===2024 SSAMM - Bioinformatics Tools and Online Resources=== | ||
==Strains== | |||
Streptomyces.org streptomyces.org.uk Links to resources including StrepDB and a free download of the Streptomyces manual. | Streptomyces.org streptomyces.org.uk Links to resources including StrepDB and a free download of the Streptomyces manual. | ||
BacDive (The Bacterial Diversity Metadatabase) https://bacdive.dsmz.de/ The world’s largest database for standardized bacterial information. Look up your strain, its morphology, culture and growth condition, DNA sequence accessions, chemotaxonomic features etc. | BacDive (The Bacterial Diversity Metadatabase) https://bacdive.dsmz.de/ The world’s largest database for standardized bacterial information. Look up your strain, its morphology, culture and growth condition, DNA sequence accessions, chemotaxonomic features etc. | ||
LPSN (List of Prokaryotic names with Standing in Nomenclature) https://lpsn.dsmz.de/ Formerly PNU (Prokaryotic Nomenclature Up-to-date). Used to check the nomenclature/taxonomic standing of your strain. | LPSN (List of Prokaryotic names with Standing in Nomenclature) https://lpsn.dsmz.de/ Formerly PNU (Prokaryotic Nomenclature Up-to-date). Used to check the nomenclature/taxonomic standing of your strain. | ||
MediaDive https://mediadive.dsmz.de/ The world's largest collection of cultivation media. Your own media can be added and could be a first step in standardisation of bioassay data reportings. | MediaDive https://mediadive.dsmz.de/ The world's largest collection of cultivation media. Your own media can be added and could be a first step in standardisation of bioassay data reportings. | ||
StrainInfo https://straininfo.dsmz.de/ Provides a resolution of microbial strain identifiers by storing culture collection numbers, their relations between strain collections, and culture-associated data. | StrainInfo https://straininfo.dsmz.de/ Provides a resolution of microbial strain identifiers by storing culture collection numbers, their relations between strain collections, and culture-associated data. | ||
Revision as of 10:37, 14 November 2024
2024 SSAMM - Bioinformatics Tools and Online Resources
Strains
Streptomyces.org streptomyces.org.uk Links to resources including StrepDB and a free download of the Streptomyces manual.
BacDive (The Bacterial Diversity Metadatabase) https://bacdive.dsmz.de/ The world’s largest database for standardized bacterial information. Look up your strain, its morphology, culture and growth condition, DNA sequence accessions, chemotaxonomic features etc.
LPSN (List of Prokaryotic names with Standing in Nomenclature) https://lpsn.dsmz.de/ Formerly PNU (Prokaryotic Nomenclature Up-to-date). Used to check the nomenclature/taxonomic standing of your strain.
MediaDive https://mediadive.dsmz.de/ The world's largest collection of cultivation media. Your own media can be added and could be a first step in standardisation of bioassay data reportings.
StrainInfo https://straininfo.dsmz.de/ Provides a resolution of microbial strain identifiers by storing culture collection numbers, their relations between strain collections, and culture-associated data.
